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D. Foose Formatted Thesis.pdf (1.07 MB)

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Vespucci: A free, cross-platform software tool for spectroscopic data analysis and imaging

Foose, Daniel Patrick
http://rave.ohiolink.edu/etdc/view?acc_num=wright1472823712

Abstract Details

2016, Master of Science (MS), Wright State University, Chemistry.
Vespucci is a software application developed for imaging and analysis of hyperspectral datasets. Vespucci offers several advantages over other software packages, including a simple user interface, no cost, and less restrictive licensing. Vespucci incorporates several analysis techniques including univariate imaging, principal components analysis, partial-least-squares regression, vertex components analysis and k- means clustering. Additionally, Vespucci can perform a number of useful data-processing operations, including filtering, normalization, baseline correction, and background subtraction. Datasets that consist of spatial or temporal data with a corresponding digital signal, including spectroscopic images, mass spectrometric images, and X-ray diffraction data can be processed in this software. The use of Vespucci in Raman and surface- enhanced Raman spectroscopies has been successfully demonstrated to examine the interaction of silver nanoparticles with corundum and Dengue virus virions. A manuscript detailing Vespucci has been published in the Journal of Open Research Software (http://openresearchsoftware.metajnl.com/articles/10.5334/jors.91/). More information about Vespucci will be available at http://vespucciproject.org.
Ioana Sizemore, Ph.D. (Advisor)
David Dolson, Ph.D. (Committee Member)
Michael Raymer, Ph.D. (Committee Member)
99 p.
Biology; Biomedical Engineering; Biomedical Research; Chemical Engineering; Chemistry; Environmental Science; Materials Science; Medical Imaging; Molecular Biology; Nanotechnology; Pharmacology; Physics; Physiology; Polymer Chemistry; Polymers; Remote Sensing; Scientific Imaging; Statistics; Toxicology; Virology
chemometrics; cheminformatics; bioinformatics; spectroscopy; Raman spectroscopy; software; scientific software; data analysis

Recommended Citations

Citations

  • Foose, D. P. (2016). Vespucci: A free, cross-platform software tool for spectroscopic data analysis and imaging [Master's thesis, Wright State University]. OhioLINK Electronic Theses and Dissertations Center. http://rave.ohiolink.edu/etdc/view?acc_num=wright1472823712

    APA Style (7th edition)

  • Foose, Daniel. Vespucci: A free, cross-platform software tool for spectroscopic data analysis and imaging. 2016. Wright State University, Master's thesis. OhioLINK Electronic Theses and Dissertations Center, http://rave.ohiolink.edu/etdc/view?acc_num=wright1472823712.

    MLA Style (8th edition)

  • Foose, Daniel. "Vespucci: A free, cross-platform software tool for spectroscopic data analysis and imaging." Master's thesis, Wright State University, 2016. http://rave.ohiolink.edu/etdc/view?acc_num=wright1472823712

    Chicago Manual of Style (17th edition)

wright1472823712
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© 2016, some rights reserved.Creative Commons License Vespucci: A free, cross-platform software tool for spectroscopic data analysis and imaging by Daniel Patrick Foose is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. Based on a work at etd.ohiolink.edu.
This open access ETD is published by Wright State University and OhioLINK.