Skip to Main Content
Frequently Asked Questions
Submit an ETD
Global Search Box
Need Help?
Keyword Search
Participating Institutions
Advanced Search
School Logo
Files
File List
Thesis_SSutharzan.pdf (945.27 KB)
ETD Abstract Container
Abstract Header
A GENOME-WIDE ANALYSIS OF PERFECT INVERTED REPEATS IN
ARABIDOPSIS THALIANA
Author Info
Sutharzan, Sreeskandarajan
ORCID® Identifier
http://orcid.org/0000-0003-4776-7885
Permalink:
http://rave.ohiolink.edu/etdc/view?acc_num=miami1386848607
Abstract Details
Year and Degree
2013, Master of Science, Miami University, Botany.
Abstract
Perfect inverted repeats play wide variety of roles in genomes. In this study, we conduct a genome-wide analysis of perfect inverted repeats in
Arabidopsis thaliana
and explore the biological significance of the observed inverted repeat distribution. The roles of palindromic sequences are reviewed in chapter 1. Chapter 2 describes a tool which was developed to detect perfect inverted repeats using a novel prime number-based algorithm. Chapter 3 focuses on the performed genome-wide analysis, illustrating the observed non-random distribution of perfect inverted repeats in different genic and intergenic regions in
Arabidopsis
genome.
Committee
Chun Liang, PHD (Advisor)
Daniel Gladish, PHD (Committee Member)
John Karro, PHD (Committee Member)
Pages
46 p.
Subject Headings
Bioinformatics
Keywords
perfect inverted repeats
;
DNA palindromes
;
prime numbers
;
cumulative score system
;
Matlab-based tool
;
genome-wide analysis
Recommended Citations
Refworks
EndNote
RIS
Mendeley
Citations
Sutharzan, S. (2013).
A GENOME-WIDE ANALYSIS OF PERFECT INVERTED REPEATS IN
ARABIDOPSIS THALIANA
[Master's thesis, Miami University]. OhioLINK Electronic Theses and Dissertations Center. http://rave.ohiolink.edu/etdc/view?acc_num=miami1386848607
APA Style (7th edition)
Sutharzan, Sreeskandarajan.
A GENOME-WIDE ANALYSIS OF PERFECT INVERTED REPEATS IN
ARABIDOPSIS THALIANA
.
2013. Miami University, Master's thesis.
OhioLINK Electronic Theses and Dissertations Center
, http://rave.ohiolink.edu/etdc/view?acc_num=miami1386848607.
MLA Style (8th edition)
Sutharzan, Sreeskandarajan. "A GENOME-WIDE ANALYSIS OF PERFECT INVERTED REPEATS IN
ARABIDOPSIS THALIANA
." Master's thesis, Miami University, 2013. http://rave.ohiolink.edu/etdc/view?acc_num=miami1386848607
Chicago Manual of Style (17th edition)
Abstract Footer
Document number:
miami1386848607
Download Count:
468
Copyright Info
© 2013, all rights reserved.
This open access ETD is published by Miami University and OhioLINK.